Methods

Recent articles

Speech bubbles and images of a brain overlaid on a globe.

A community-designed experiment tests open questions in predictive processing

More than 50 scientists came together to identify the key missing data needed to rigorously test theoretical models.

By Jérôme Lecoq
12 November 2025 | 6 min read
Hands hold a scroll-like object made of ones and zeroes.

How neuroscientists are using AI

Eight researchers explain how they are using large language models to analyze the literature, brainstorm hypotheses and interact with complex datasets.

By The Transmitter
4 November 2025 | 17 min listen
Research image of altered neurovascular coupling after exposure to psychedelics.

Psychedelics muddy fMRI results: Q&A with Adam Bauer and Jonah Padawer-Curry

The drugs disrupt the link between vascular and neuronal activity, which complicates interpretations of fMRI data. Adopting a more holistic view of what constitutes brain activity may help, the researchers say.

By Calli McMurray
29 October 2025 | 7 min read

Vicente Raja brings ecological psychology concepts to neuroscience

He suggests neuroscientists should pay more attention to the principles of Gibsonian ecological psychology, such as affordances, ecological information and resonance, to better explain perception and action.

By Paul Middlebrooks
22 October 2025 | 99 min listen
Photograph of a real bird looking at a model bird.

Robots marry natural neuroscience, experimental control to probe animal interactions

Faux fish and birds are helping researchers decipher some of the rules that govern schooling and squawking, among other social behaviors.

By Calli McMurray
19 September 2025 | 7 min read
Illustration of human figures holding brightly colored connected dots.

This paper changed my life: Dan Goodman on a paper that reignited the field of spiking neural networks

Friedemann Zenke’s 2019 paper, and its related coding tutorial SpyTorch, made it possible to apply modern machine learning to spiking neural networks. The innovation reinvigorated the field.

By Dan Goodman
17 September 2025 | 5 min listen
Illustration of a brain and screens of computer code.

Should neuroscientists ‘vibe code’?

Researchers are developing software entirely through natural language conversations with advanced large language models. The trend is transforming how research gets done—but it also presents new challenges for evaluating the outcomes.

By Benjamin Dichter
25 August 2025 | 9 min listen
A series of colored rectangles in a cosmos-like black space.

The challenge of defining a neural population

Our current approach is largely arbitrary. We need new methods for grouping cells, ideally by their dynamics.

By Mark Humphries
11 August 2025 | 9 min listen
Artistic illustration of a neural manifold.

Neural population-based approaches have opened new windows into neural computations and behavior

Neural manifold properties can help us understand how animal brains deal with complex information, execute flexible behaviors and reuse common computations.

By Matthew Perich
4 August 2025 | 8 min listen
Research image of a mouse brain with the same spot shown three times in different colors to show different neurochemical concentrations.

New dopamine sensor powers three-color imaging in live animals

The tool leverages a previously unused segment of the color spectrum to track the neurotransmitter and can be used with two additional sensors to monitor other neurochemicals at different wavelengths.

By Diana Kwon
25 July 2025 | 5 min listen

Explore more from The Transmitter

Abstract flowing shapes.

Perimenopause: An important—and understudied—transition for the brain

Many well-known perimenopause symptoms arise in the brain, but we still know little about the specific mechanisms at play. More research—in both animals and humans—is essential.

By Marija Kundakovic
12 November 2025 | 7 min listen
Colorful drawing of a human brain.

‘Neuroethics: The Implications of Mapping and Changing the Brain,’ an excerpt

In his new book, published today, philosopher Walter Glannon examines the ethics of six areas of neuroscience. In Chapter 4, a portion of which appears below, he tackles the ethical considerations of using brain organoids in research.

By Walter Glannon
11 November 2025 | 7 min read
Human brain cross-sections.

Teasing out mosaicism cell by cell; and more

Here is a roundup of autism-related news and research spotted around the web for the week of 10 November.

By Jill Adams
11 November 2025 | 2 min read

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