Bioinformatics

Recent articles

Illustration of hands organizing objects of various shapes and sizes.

Simply making data publicly available isn’t enough. We need to make it easy — that requires community buy-in.

I helped create a standard to make it easy to upload, analyze and compare functional MRI data. An ecosystem of tools has since grown up around it, boosting reproducibility and speeding up research.

By Russell Poldrack
17 January 2024 | 7 min read
Digital illustration of Prevotella bacteria.

Gut microbiome meta-analysis reveals consistent autism signal

But the field needs to move on from cross-sectional studies to gain insights into the causes and consequences of the association, experts say.

By Calli McMurray
22 August 2023 | 5 min read
Illustration of neurons.

Chromatin remodeling tied to altered splicing in autism model

Exposing neurons to valproic acid, a well-known environmental risk factor for autism, disrupts their ability to generate different proteins from the same gene.

By Giorgia Guglielmi
7 February 2023 | 5 min read
A pattern in the style of genetic sequencing forms into the shape of the African continent.

Africa’s genomic role: Q&A with Conrad Iyegbe and Niran Okewole

Psychiatric genomics promises to shed light on the genetic basis of autism, but it’s vital to include Africa in this research, Iyegbe and Okewole say.

By Charles Q. Choi
28 November 2022 | 7 min read
Illustration of two chromosomes with copy number variants.

‘Dosage sensitivity map’ predicts active ingredients in copy number variants

The catalog of rare copy number variants tied to autism and other conditions could help researchers identify which genes account for the mutations’ effects.

By Peter Hess
31 August 2022 | 4 min read
Conceptual illustration of chromosomal abnormalities

Lumping versus splitting with autism-linked variants: A conversation with Vanessa Vogel-Farley and Yssa DeWoody

Researchers have long studied subgroups of people who share genetic variants, but the newly formed ‘CNV Commission’ is also looking at people with shared traits across different neurodevelopmental conditions.

By Peter Hess
22 August 2022 | 5 min read
Brain made up of two different medicines

Meet the company trying precision medicine for autism

Swiss biotech Stalicla hopes to bring precision medicine to autism. Experts praise efforts to identify autism subgroups, but evidence to support the company’s claims has yet to be seen.

By Giorgia Guglielmi
27 June 2022 | 12 min listen
Cerebral cortex transcript

Alternate RNA versions of genes may shape autism

Autism may involve different levels of RNA isoforms encoded by genes in the brain, which express many more proteins than previously thought.

By Giorgia Guglielmi
7 January 2022 | 5 min read
Markov cluster showing protein interactions in mice.

Protein atlas doubles number of known interactions in mice

Thousands of protein-protein interactions mapped in mice reveal how these networks shift across seven kinds of tissue.

By Niko McCarty
26 August 2021 | 4 min read

Ultra-rare variants point to new autism candidate genes

A large, whole-genome sequencing study of families yields insights into ultra-rare genetic variants that contribute to autism.

By Niko McCarty
26 July 2021 | 4 min read

Explore more from The Transmitter

Research image of neural progenitor cells derived from people with 16p11.2 duplications and 16p11.2 deletions, which have cilia that are shorter or longer, respectively, than in controls.

Protein interactions important to SYNGAP1-related conditions; and more

Here is a roundup of autism-related news and research spotted around the web for the week of 8 September.

By Jill Adams
9 September 2025 | 2 min read
Sleep-control neurons glow cyan in the central nervous system of a fly.

Mitochondria set ‘ancient’ metabolic thermostat for sleep in flies, separate from circadian rhythms

During waking hours, a specialized set of sleep neurons in the fly brain accumulates reactive oxygen species, which eventually trigger sleep to clean up and repair the damage they do.

By Viviane Callier
9 September 2025 | 7 min listen
Collage of black researchers, buildings at HBCUs and scientific equipment.

Building the future of neuroscience at HBCUs

Black In Neuro is launching a new program to help historically Black colleges and universities advance neuroscience research and education, focusing on cross-institutional collaboration, joint curriculum development and improved mentoring initiatives.

By Jheannelle Johnson
8 September 2025 | 8 min listen

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