Methods

Recent articles

A scientist chases falling code with a butterfly net in a spare landscape with beautiful high clouds.

AI-assisted coding: 10 simple rules to maintain scientific rigor

These guidelines can help researchers ensure the integrity of their work while accelerating progress on important scientific questions.

By Russell Poldrack
16 December 2025 | 7 min read
Research image of a virtual environment simulating an animal’s viewpoint close to the ground.

Seeing the world as animals do: How to leverage generative AI for ecological neuroscience

Generative artificial intelligence will offer a new way to see, simulate and hypothesize about how animals experience their worlds. In doing so, it could help bridge the long-standing gap between neural function and behavior.

By Shahab Bakhtiari
8 December 2025 | 8 min read
A hand holds a clear rectangular prism up to a series of abstract patterns, offering a new view of them.

Beyond the algorithmic oracle: Rethinking machine learning in behavioral neuroscience

Machine learning should not be a replacement for human judgment but rather help us embrace the various assumptions and interpretations that shape behavioral research.

By Nedah Nemati, Matthew Whiteway
3 December 2025 | 7 min read
A tree limb-like pattern superimposed over a landscape.

Tracing neuroscience’s family tree to track its growth

By mapping connections among researchers, Neurotree makes it possible to see how the field has evolved and how shifts in lab size, publication rates and training, among other factors, shape its direction.

By Stephen David
15 November 2025 | 7 min read
Portion of The Transmitter’s state of neuroscience semantic map.

Putting 50 years of neuroscience on the map

Navigate the rise and fall of research topics over five decades using our interactive map, which is based on a semantic analysis of nearly 350,000 abstracts in leading neuroscience journals.

By The Transmitter
15 November 2025 | 3 min read
Illustration of two hands holding an abstract geometric object that resembles a human brain.

The state of neuroscience in 2025: An overview

The Transmitter presents a portrait of the field through four lenses: its focus, its output, its people and its funding.

By The Transmitter
15 November 2025 | 4 min read
Concentric circles.

What are the most transformative neuroscience tools and technologies developed in the past five years?

Artificial intelligence and deep-learning methods featured prominently in the survey responses, followed by genetic tools to control circuits, advanced neuroimaging, transcriptomics and various approaches to record brain activity and behavior.

By The Transmitter
15 November 2025 | 14 min read
Research image of fMRI scans on a black background.

Timing tweak turns trashed fMRI scans into treasure

Leveraging start-up “dummy scans,” which are typically discarded in imaging analyses, can shorten an experiment’s length and make data collection more efficient, a new study reveals.

By Angie Voyles Askham
13 November 2025 | 6 min read
Speech bubbles and images of a brain overlaid on a globe.

A community-designed experiment tests open questions in predictive processing

More than 50 scientists came together to identify the key missing data needed to rigorously test theoretical models.

By Jérôme Lecoq
12 November 2025 | 6 min read
Hands hold a scroll-like object made of ones and zeroes.

How neuroscientists are using AI

Eight researchers explain how they are using large language models to analyze the literature, brainstorm hypotheses and interact with complex datasets.

By The Transmitter
4 November 2025 | 15 min read

Explore more from The Transmitter

Illustration of an open journal featuring lines of text and small illustrations of eyes and mouths.

Glutamate receptors, mRNA transcripts and SYNGAP1; and more

Here is a roundup of autism-related news and research spotted around the web for the week of 15 December.

By Jill Adams
16 December 2025 | 2 min read
Collage illustration of Shari Wiseman

Frameshift: Shari Wiseman reflects on her pivot from science to publishing

As chief editor of Nature Neuroscience, Wiseman applies critical-thinking skills she learned in the lab to manage the journal’s day-to-day operations.

By Katie Moisse
15 December 2025 | 7 min read
Close up of thumb and forefinger holding a transparent red and white capsule pill with a lab inside it.

How basic neuroscience has paved the path to new drugs

A growing list of medications—such as zuranolone for postpartum depression, suzetrigine for pain, and the gepants class of migraine medicines—exist because of insights from basic research.

By Alex Kwan
15 December 2025 | 6 min read

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