Microscopy

Recent articles

Optimized two-photon microscopy enables voltage imaging at multiple depths

The tool could reveal how information flows within and between cortical layers during neural processing.

By Simon Makin
11 August 2026 | 4 min read

A planetarium for the brain

Tyler Sloan’s new film, more than a decade in the making, takes viewers on an immersive journey.

By Emily Singer
27 July 2026 | 1 min watch
Adam Kampff.

Remembering Adam Kampff, neuroscience educator and researcher

Kampff’s do-it-yourself approach inspired a generation of neuroscientists.

By Lauren Schneider
24 December 2025 | 6 min read
Research image of a mouse brain with the same spot shown three times in different colors to show different neurochemical concentrations.

New dopamine sensor powers three-color imaging in live animals

The tool leverages a previously unused segment of the color spectrum to track the neurotransmitter and can be used with two additional sensors to monitor other neurochemicals at different wavelengths.

By Diana Kwon
25 July 2025 | 4 min read
Detailed image of neurons in the mouse visual cortex.

Inhibitory cells work in concert to orchestrate neuronal activity in mouse brain

A cubic millimeter of brain tissue, meticulously sectioned, stained and scrutinized over the past seven years, reveals in stunning detail the role of inhibitory interneurons in brain structure and function.

By Katie Moisse
9 April 2025 | 6 min read
Astrocytes in a mouse brain.

Unexpected astrocyte gene flips image of brain’s ‘stalwart sentinels’

The genetic marker upends the accepted orientation of non-star-like astrocytes in the glia limitans superficialis.

By Lauren Schenkman
28 March 2025 | 5 min read

New tissue-clearing techniques let microscopes peer deeper into living brains

Washing mouse brain tissue with a blood protein or complex sugar can illuminate cells 550 micrometers into the cortex without compromising its normal physiology.

By Calli McMurray
18 October 2024 | 0 min watch

Octopus arm anatomy, molecular makeup revealed in new maps

The datasets provide “a very nice reference” for future functional studies.

By Calli McMurray
25 September 2024 | 1 min watch
A dense reconstruction of layer 2/3 neurons of the mouse visual cortex containing 394 neurons and 3.2 million synapses.

To develop better nervous-system visualizations, we need to think BIG

With a full mouse connectome on the horizon, neuroscience needs to overcome its legacy of minimalism and embrace the contemporary challenge of representing whole-nervous-system connectivity.

By Tyler Sloan
8 July 2024 | 8 min read
Image of neural activity in a mouse as seen through the Miniscope.

Designing an open-source microscope

Funding for the development of open-source tools is on the rise, but support for their maintenance and dissemination, both crucial for their meaningful uptake, remains a major challenge.

By Daniel Aharoni
17 June 2024 | 6 min read

Explore more from The Transmitter

Two trajectories cross over each other showing areas of alignment and misalignment.

Mind over metrics: How can we tell if two brains (or AI models) are alike?

The ability to record from large populations of neurons has triggered the development of myriad methods for comparing them. But we’re still grappling with how to convert measures of likeness into a better mechanistic understanding.

By Alex Williams
17 August 2026 | 7 min read
Mice playing, engaged in learning and memory: some of their brains are yellow, and some are red, matching a red and yellow legend that runs through the image to underscore both memory and learning.

This paper changed my life: A technical breakthrough for memory studies

In a 2007 Science paper, Mark Mayford and his colleagues found that some neurons activated during learning are also recruited during memory retrieval. Noelia Weisstaub shares how this study and others drove an era of great progress in tool development.

By Noelia Weisstaub
14 August 2026 | 5 min read

Early experience reshapes zebrafish retinal cells, alters behavior

The cells undergo a classic form of plasticity previously thought to occur only in downstream visual circuits.

By Siddhant Pusdekar
13 August 2026 | 0 min watch